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DIstributed Computing Environments (DICE) Team
We are a group of computer scientists and IT experts from the Department of Computer Science AGH and ACC Cyfronet AGH. We are a curiosity- and research-driven team, specializing in large-scale distributed computing, HPC, Web and Cloud technologies. We develop new methods, tools and environments and we apply these solutions in e-Science, healthcare and industrial domains.


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You are here: Home Publications filters Publications of Tomasz Gubala

Publications of Tomasz Gubala

2020

  • Bubak M., Czechowicz K., Gubała T., Hose D. R., Kasztelnik M., Malawski M., Meizner J., Nowakowski P. and Wood S.: The EurValve model execution environment. Interface Focus. 11: 20200006. http://doi.org/10.1098/rsfs.2020.0006 (2020)

  • Szadkowska P, Wojtas B, Waller T, Licholai S , Zukowski K, Gubala T, Karpeta M; Wilkus K, Nawrocki S, Kaspera W, Kaminska B.: Targeted next generation sequencing of cell-free circulating tumor DNA from blood sample as a diagnostic tool for glial and metastatic brain tumor patients. EACR (European Association for Cancer Research) Virtual Conference on Liquid Biopsies, 18-19.11.2020 (2020)

  • Szadkowska P, Wojtas B, Waller T, Licholai S , Zukowski K, Gubala T, Karpeta M; Wilkus K, Nawrocki S, Kaspera W, Kaminska B.: Targeted next generation sequencing of cell-free circulating tumor DNA from blood sample as a diagnostic tool for glial and metastatic brain tumor patients. ISLB (International Society of Liquid Biopsy) Annual Virtual Congress, 30.10.2020. (2020)

  • L. Martí-Bonmatí, Á. Alberich-Bayarri, R. Ladenstein, I. Blanquer, J. Damian Segrelles, L. Cerdá-Alberich, P. Gkontra, B. Hero, J.M. García-Aznar, D. Keim, W. Jentner, K. Seymour, A. Jiménez-Pastor, I. González-Valverde, B. Martínez de las Heras, S. Essiaf, D. Walker, M. Rochette, M. Bubak, J. Mestres, M. Viceconti, G. Martí-Besa, A. Cañete, P. Richmond, K. Y. Wertheim, T. Gubala, M. Kasztelnik, J. Meizner, P. Nowakowski, S. Gilpérez, A. Suárez, M. Aznar, G. Restante and E. Neri: PRIMAGE project: predictive in silico multiscale analytics to support childhood cancer personalised evaluation empowered by imaging biomarkers, European Radiology Experimental 4:22, https://doi.org/10.1186/s41747-020-00150-9 (2020)

2019

  • Szadkowska P, Mieczkowski J, Zukowski K, Waller T, Licholai S, Gubala T, Karpeta M; Wilkus K, Nawrocki S, Kaspera W, Kaminska B.: Targeted next generation sequencing of cell-free circulating tumor DNA from blood samplesas a diagnostic tool for glioma patients. EACR-ESMO Joint Conference on Liquid Biopsies,  Bergamo, Italy, 15 - 17 Maj 2019; Książka abstraktów str. 136, poster nr 92 (2019)

2017

  • A. H. Eckes, T. Gubała, P. Nowakowski, T. Szymczyszyn, R. Wells, J. A. Irwin, C. Horro, J. M. Hancock, G. King, S. C. Dyer, W. Jurkowski: Introducing the Brassica Information Portal: Towards integrating genotypic and phenotypic Brassica crop data [version 1; referees: 3 approved]. F1000Research 2017, 6:465 (doi: 10.12688/f1000research.11301.1) (2017)

2016

  • M. Bubak, B. Balis, D. Harezlak, M. Kasztelnik, P. Nowakowski, T. Bartynski, T. Gubala, M. Malawski, M. Pawlik, B. Wilk: The ISMOP IT platform for smart levee monitoring and flood decision support. In: KU KDM 2016 Ninth ACC Cyfronet AGH HPC Users' Conference, Zakopane 16–18 March 2016, Proceedings / ed. Kazimierz Wiatr, Jacek Kitowski, Marian Bubak. — Kraków : ACC Cyfronet AGH, 2016. — ISBN: 978-83-61433-18-7, pp 35-36 (2016)

2015

2014

  • M. Bubak, B. Baliś, T. Bartyński, T. Gubała, D. Harężlak, M. Kasztelnik, M. Malawski, J. Meizner, P. Nowakowski, B. Wilk, and P. Suder: From VPH-Share to PL-Grid: Atmosphere as as a Frontend to Cloud Resources in Research Infrastructures. In: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'14, October 27-29 2014, ACC-Cyfronet AGH, 2014, Krakow, pp. 23-24 (2014)

  • K. Rycerz, M. Bubak, E. Ciepiela, M. Pawlik, O. Hoenen, D. Harężlak, B. Wilk, T. Gubała, J. Meizner, D. Coster: Enabling Multiscale Fusion Simulations on Distributed Computing Resources. In: M. Bubak, J. Kitowski, K. Wiatr (Eds.): eScience on Distributed Computing Infrastructure, LNCS, Vol. 8500. Springer, pp. 195-210 (2014)

  • M. Bubak, B. Baliś, D. Harężlak, M. Kasztelnik, P. Nowakowski, T. Bartyński, T. Gubala, M. Malawski, M. Pawlik, and B. Wilk: An approach to monitoring, data analytics, and decision support for levee supervision. In: K. Wiatr, J. Kitowski, M. Bubak (Eds) Proceedings of the Seventh ACC Cyfronet AGH Users’ Conference, ACC CYFRONET AGH, Kraków, ISBN 978-83-61433-09-5, pp. 75-76 (2014)

  • P. Nowakowski, M. Malawski, T. Bartyński, D. Harężlak, T. Gubała, M. Kasztelnik, J. Meizner, B. Wilk, and M. Bubak: New Features of the Cloud Platform for VPH Applications. In: K. Wiatr, J. Kitowski, M. Bubak (Eds) Proceedings of the Seventh ACC Cyfronet AGH Users’ Conference, ACC CYFRONET AGH, Kraków, ISBN 978-83-61433-09-5, pp. 71-72 (2014)

2013

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