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DIstributed Computing Environments (DICE) Team
We are a group of computer scientists and IT experts from the Department of Computer Science AGH and ACC Cyfronet AGH. We are a curiosity- and research-driven team, specializing in large-scale distributed computing, HPC, Web and Cloud technologies. We develop new methods, tools and environments and we apply these solutions in e-Science, healthcare and industrial domains.


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Parts in Books or Collections

2014

  • K. Rycerz, M. Bubak, E. Ciepiela, M. Pawlik, O. Hoenen, D. Harężlak, B. Wilk, T. Gubała, J. Meizner, D. Coster: Enabling Multiscale Fusion Simulations on Distributed Computing Resources. In: M. Bubak, J. Kitowski, K. Wiatr (Eds.): eScience on Distributed Computing Infrastructure, LNCS, Vol. 8500. Springer, pp. 195-210 (2014)

  • D. Harężlak, M. Kasztelnik, M. Pawlik, B. Wilk, and M. Bubak: A Lightweight Method of Metadata and Data Management with DataNet. In: M. Bubak, J. Kitowski, K. Wiatr (Eds.): eScience on Distributed Computing Infrastructure, LNCS, Vol. 8500. Springer, pp. 164-177 (2014)

  • E. Ciepiela, B. Wilk, D. Harężlak, M. Kasztelnik, M. Pawlik, and M. Bubak: Towards Provisioning of Reproducible, Reviewable and Reusable In-Silico Experiments with the GridSpace2 Platform. In: M. Bubak, J. Kitowski, K. Wiatr (Eds.): eScience on Distributed Computing Infrastructure, LNCS, Vol. 8500. Springer, pp. 118-129 (2014)

  • J. Meizner, M. Nabożny, M. Radecki, T. Szepieniec, and M. Zdybał: Recent Advances of the Cloud Platform Delivered in the Infrastructure as a Service Model for the PL-Grid Scientific Communities. In: M. Bubak, J. Kitowski, K. Wiatr (Eds.): eScience on Distributed Computing Infrastructure, LNCS, Vol. 8500. Springer, pp. 54-60 (2014)

2012

  • J. Kocot, T. Szepieniec, D. Harężlak, K. Noga, M. Sterzel: InSilicoLab – Managing Complexity of Chemistry Computations. In: M. Bubak, T. Szepieniec, K. Wiatr (Eds) Building a National Distributed e-Infrastructure - PL-Grid - Scientific and Technical Achievements, Springer 2012, ISBN 978-3-642-28266-9, pp. 265-275 (2012)

  • T. Jadczyk, M. Malawski, M. Bubak, I. Roterman: Examining Protein Folding Process Simulation and Searching for Common Structure Motifs in a Protein Family as Experiments in the GridSpace2 Virtual Laboratory. In: M. Bubak, T. Szepieniec, K. Wiatr (Eds) Building a National Distributed e-Infrastructure - PL-Grid - Scientific and Technical Achievements, Springer 2012, ISBN 978-3-642-28266-9, pp. 252-264 (2012)

  • E. Ciepiela, L. Zaraska, G. D. Sulka: GridSpace2 Virtual Laboratory Case Study: Implementation of Algorithms for Quantitative Analysis of Grain Morphology in Self-assembled Hexagonal Lattices According to the Hillebrand Method. In: M. Bubak, T. Szepieniec, K. Wiatr (Eds) Building a National Distributed e-Infrastructure - PL-Grid - Scientific and Technical Achievements, Springer 2012, ISBN 978-3-642-28266-9, pp. 240-251 (2012)

  • E. Ciepiela, P. Nowakowski, J. Kocot, D. Harezlak, T. Gubala, J. Meizner, M. Kasztelnik, T. Bartynski, M. Malawski, M. Bubak: Managing Entire Lifecycles of e-Science Applications in the GridSpace2 Virtual Laboratory - From Motivation through Idea to Operable Web-Accessible Environment Built on a Top of PL-Grid e-Infrastructure. In: M. Bubak, T. Szepieniec, K. Wiatr (Eds) Building a National Distributed e-Infrastructure - PL-Grid - Scientific and Technical Achievements, Springer 2012, ISBN 978-3-642-28266-9, pp. 228-239 (2012)

  • D. Harezlak, M. Kasztelnik, E. Ciepiela, M. Bubak: Scripting Language Extensions Offered by the GridSpace Experiment Platform. In: M. Bubak, T. Szepieniec, K. Wiatr (Eds) Building a National Distributed e-Infrastructure - PL-Grid - Scientific and Technical Achievements, Springer 2012, ISBN 978-3-642-28266-9, pp. 217-227 (2012)

  • T. Szepieniec, M. Tomanek, M. Radecki, M. Szopa, M. Bubak: Implementation of Service Level Management in PL-Grid Infrastructure. In: M. Bubak, T. Szepieniec, K. Wiatr (Eds) Building a National Distributed e-Infrastructure - PL-Grid - Scientific and Technical Achievements, Springer 2012, ISBN 978-3-642-28266-9, pp. 171-181 (2012)

  • J. Meizner, E. Ciepiela, P. Nowakowski, J. Kocot, M. Malawski, M. Bubak: Flexible and Extendable Mechanism Enabling Secure Access to e-Infrastructures and Storage of Confidential Data for the GridSpace2 Virtual Laboratory. In: M. Bubak, T. Szepieniec, K. Wiatr (Eds) Building a National Distributed e-Infrastructure - PL-Grid - Scientific and Technical Achievements, Springer 2012, ISBN 978-3-642-28266-9, pp. 89-101 (2012)

2011

  • K. Rycerz and M. Bubak: Building and Running Collaborative Distributed Multiscale Applications. In: W. Dubitzky, K. Kurowsky, B. Schott (Eds) Large-Scale Computing Techniques for Complex System Simulations, Chapter 6, pp. 111-130. J. Wiley and Sons (2011)

  • M. Malawski, T. Gubala, M. Bubak: Wirtualne laboratorium dla chorob zakaznych - ViroLab. In: I. Roterman-Konieczna (eds.) Elementy Informatyki Medycznej: Sciezki kliniczne, wirtualny pacject, telekonsultacje, Wydawnictwo Universytetu Jagiellonskiego, vol. 3038, pp. 167-186, ISBN 978-83-233-2958-9 (2011)

2009

  • M. Bubak, T. Gubala, M. Kasztelnik, M. Malawski: Building Collaborative Applications for System-level Science. In: W. Gentzsch, L. Grandinetti, G. Joubert (eds.) Advances in Parallel Computing, Vol. 18, 2009, High Speed and Large Scale Scientific Computing, ISBN 978-1-60750-073-5, doi: 10.3233/978-1-60750-073-5-299 (2009)
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