MAPPER (2010-2013)

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The MAPPER project responded to the critical need by developing computational strategies, software and services for distributed multiscale simulations across disciplines, exploiting existing and evolving European e-Infrastructure. This project was driven by the computational needs of seven exemplary multiscale problems from a variety of disciplines including Systems Biology, Fusion, Physiology, Engineering and nano-Material Science. Mapper used and enhanced existing solutions to support the multiscale simulation community, building simulation systems such as GridSpace.

We would be very grateful for your opinions. If you are using our ideas or tools, please cite appropriate papers from the list of Publications related to MAPPER.

Official project website: http://www.mapper-project.eu/

MAPPER account on Twitter: https://twitter.com/MAPPER_Project

MAPPER Tutorials

MAPPER Presentations

K. Rycerz: Multiscale Application Support in the MAPPER project, ACC Cyfronet AGH Open Day, Krakow, Poland, 25 November 2013
E. Ciepiela, D. Harężlak, M. Kasztelnik, B. Wilk, M. Pawlik, J. Meizner, M. Bubak: GridSpace2: Virtual Laboratory in World Wide Web, EGI Community Forum 2013, Manchester, UK, 9 April 2013
E. Ciepiela, B. Wilk, D. Harężlak, M. Kasztelnik, M. Pawlik, J. Meizner, M. Bubak: GridSpace2 – Towards Science-as-a-Service Model, KU KDM 2013, Zakopane, Poland, 28 February 2013
K. Rycerz, M. Bubak and WP8 team: MAPPER Multiscale Programming and Execution Tools. WP8 after year 2, 2nd Project Review, Amsterdam, The Netherlands, 28 November 2012
K. Rycerz, D. Harężlak, G. Dyk, E. Ciepiela, T. Gubała, J. Meizner, M. Bubak: Programming and Execution of Multiscale Applications, Cracow Grid Workshop 2012, Kraków, Poland, 22 October 2012
K. Rycerz (speaker), E. Ciepiela, G. Dyk, T. Gubała, D. Harężlak, J. Meizner, M. Bubak: Multiscale Programming and Execution Tools in the MAPPER project, EGI Technical Forum 2012, Workflow community workshop, Prague, Czech Republic, 21 September 2012
M. Bubak (speaker), G. Harezlak, G. Dyk: Tools for programming and execution of multiscale applications, SCI-BUS, SHIWA, EDGI joint Summer School on Workflows and Gateways for Grids and Clouds - Introducing the latest developments in Grid and Cloud computing, Budapest, Hungary, 2-6 July 2012
M. Bubak: Multiscale Applications on European e-Infrastructures, Chalmers e-Science initiative seminar, Göteborg, Sweden, 1-2 December, 2011
M. Bubak, K. Rycerz and WP8 team: MAPPER Multiscale Programming and Execution Tools. WP8 after year 1, 24 November, 2011
K. Rycerz and M. Bubak: Component Approach to Distributed Multiscale Simulations, SIMULTECH 2011, 1st International Conference on Simulation, Modeling Technologies and Applications, Noordwijkerhout, The Netherlands, 29-31 July, 2011
K. Rycerz, E. Ciepiela, J. Kocot, M. Nowak, P. Pierzchała, M. Bubak: Towards an Environment for Multiscale Applications, KUKDM in Zakopane, Poland (2011)
K. Rycerz, E. Ciepiela, D. Harezlak, M. Bubak: Towards Multiscale Computing Tools based on GridSpace, CGW'10 (2010)

MAPPER Posters and Flyers

Semantic Integration for Model-based Life Science Applications (PDF: A4), T. Gubala, K. Prymula, P. Nowakowski, M. Bubak. In: SIMULTECH 2013 Proceedings of the 3rd International Conference on Simulation and Modeling Methodologies, Technologies and Applications, Reykjavik, Iceland 29 - 31 July, 2013, pp. 74-81.

Efficient Execution of Grid-based Multiscale Applications for Metallurgical Industry (PDF: A4), Łukasz Rauch, Mateusz Ambroziński, Krzysztof Bzowski, Maciej Pietrzyk, Eryk Ciepiela, Katarzyna Rycerz, Bartosz Wilk, Marian Bubak; Summer School on Grid and Cloud Workflows and Gateways 2013, SZTAKI, Budapest, Hungary, 1-6 July 2013.

Composing, Executing and Sharing Multiscale Applications in an Integrated Environment (PDF: A4), Katarzyna Rycerz, Eryk Ciepiela, Daniel Harężlak, Maciej Pawlik, Tomasz Gubała, Jan Meizner, Marian Bubak; Summer School on Grid and Cloud Workflows and Gateways 2013, SZTAKI, Budapest, Hungary, 1-6 July 2013.

Programming and Execution of Multiscale Applications (PDF: A4), Katarzyna Rycerz, Eryk Ciepiela, Tomasz Gubała, Daniel Harężlak, Grzegorz Dyk, Jan Meizner, and Marian Bubak; poster presented during Cracow Grid Workshop 2012; 22-24 October 2012, Kraków, Poland.

Programming and Execution of Multiscale Applications on Distributed Infrastructures (PDF: A4, A0; PPT: A4, A0), Katarzyna Rycerz, Eryk Ciepiela, Tomasz Gubała, Daniel Harężlak, Joanna Kocot, Grzegorz Dyk, Jan Meizner and Marian Bubak; poster presented during Cracow Grid Workshop 2011; 7-9 November 2011, Kraków, Poland (see related presentation).

MAPPER Manuals

MAPPER Deliverables

MAPPER Movies


Multiscale Application Designer and GridSpace Experiment Workbench used on the example of Irrigation Canals simulation (thanks to Mohamed Ben Belgacem and Bestien Chopard, University of Geneva)	Provenance Tracking system used for Irrigation Canals simulation

Multiscale Application Designer and GridSpace Experiment Workbench used on the example of nanomaterials simulation with AHE (thanks to Stefan Zasada and Derek Groen, UCL, UK)	Presentation of MAPPER Memory, Multiscale Application Designer and GridSpace Experiment Workbench tools on the example of "Ant and Elephant" application

Generation and execution of skeleton "ant and elephant" application in GridSpace and registration in MaMe – loosely coupled part with nanoscale module presented at WP7-8 meeting in Krakow, 4-6.07.2011	Generation and execution of skeleton "ant and elephant" application in GridSpace and registration in MaMe – tightly coupled part presented at WP7-8 meeting in Krakow, 4-6.07.2011

Instent restenosis 2D application working within GridSpace on PL-Grid cluster and QCG infrastructure presented at AHM Munich, 14-17.02.2011	HLA-based multiscale dense stellar systems simulation in GridSpace – case 1 presented at kick-off meeting Amsterdam, 6-8.10.2010

HLA-based multiscale dense stellar systems simulation in GridSpace – case 2 presented at kick-off meeting Amsterdam, 6-8.10.2010

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